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LOC111433519 probable starch synthase 4, chloroplastic/amyloplastic [ Cucurbita moschata (crookneck pumpkin) ]

Gene ID: 111433519, updated on 18-Sep-2024

Summary

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Gene symbol
LOC111433519
Gene description
probable starch synthase 4, chloroplastic/amyloplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita moschata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111433519 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268559.1 (704188..713864, complement)

NW_019268559.1Genomic Context describing neighboring genes Neighboring gene chlorophyll a-b binding protein of LHCII type 1-like Neighboring gene chlorophyll a-b binding protein of LHCII type 1 Neighboring gene protein REDUCED WALL ACETYLATION 1-like Neighboring gene probable WRKY transcription factor 28

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019268559 Unplaced Scaffold Reference Cmos_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable starch synthase 4, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cmos_1.0

Genomic

  1. NW_019268559.1 Reference Cmos_1.0

    Range
    704188..713864 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023070571.1 → XP_022926339.1  probable starch synthase 4, chloroplastic/amyloplastic isoform X1

    UniProtKB/TrEMBL
    A0A6J1EEU0
    Conserved Domains (1) summary
    cl28204
    Location:1 → 1010
    GlgA; Glycogen synthase [Carbohydrate transport and metabolism]

  2. XM_023070573.1 → XP_022926341.1  probable starch synthase 4, chloroplastic/amyloplastic isoform X2

    UniProtKB/TrEMBL
    A0A6J1EEL2
    Conserved Domains (1) summary
    cl28204
    Location:1 → 995
    GlgA; Glycogen synthase [Carbohydrate transport and metabolism]

  3. XM_023070572.1 → XP_022926340.1  probable starch synthase 4, chloroplastic/amyloplastic isoform X1

    UniProtKB/TrEMBL
    A0A6J1EEU0
    Conserved Domains (1) summary
    cl28204
    Location:1 → 1010
    GlgA; Glycogen synthase [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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