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LOC111433164 hydroxyproline O-galactosyltransferase GALT2-like [ Cucurbita moschata (crookneck pumpkin) ]

Gene ID: 111433164, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111433164
Gene description
hydroxyproline O-galactosyltransferase GALT2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita moschata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111433164 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268557.1 (499587..504180, complement)

NW_019268557.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111433177 Neighboring gene uncharacterized LOC111433165 Neighboring gene CSC1-like protein ERD4 Neighboring gene uncharacterized LOC111433174 Neighboring gene auxin response factor 6-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019268557 Unplaced Scaffold Reference Cmos_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase GALT2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cmos_1.0

Genomic

  1. NW_019268557.1 Reference Cmos_1.0

    Range
    499587..504180 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023070120.1 → XP_022925888.1  hydroxyproline O-galactosyltransferase GALT2-like

    UniProtKB/TrEMBL
    A0A6J1EGH7
    Conserved Domains (1) summary
    PLN03133
    Location:140 → 678
    PLN03133; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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