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LOC111431921 polygalacturonate 4-alpha-galacturonosyltransferase-like [ Cucurbita moschata (crookneck pumpkin) ]

Gene ID: 111431921, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111431921
Gene description
polygalacturonate 4-alpha-galacturonosyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita moschata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111431921 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268553.1 (853665..862105)

NW_019268553.1Genomic Context describing neighboring genes Neighboring gene lysophospholipid acyltransferase LPEAT2-like Neighboring gene MADS-box protein SOC1-like Neighboring gene glyoxylate/hydroxypyruvate reductase HPR3-like Neighboring gene glyoxylate/hydroxypyruvate reductase HPR3-like Neighboring gene probable carboxylesterase 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019268553 Unplaced Scaffold Reference Cmos_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polygalacturonate 4-alpha-galacturonosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cmos_1.0

Genomic

  1. NW_019268553.1 Reference Cmos_1.0

    Range
    853665..862105
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023068644.1 → XP_022924412.1  polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X2

    UniProtKB/TrEMBL
    A0A6J1E8V8
    Conserved Domains (1) summary
    cl28622
    Location:131 → 652
    PLN02870; Probable galacturonosyltransferase

  2. XM_023068645.1 → XP_022924413.1  polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X3

    UniProtKB/TrEMBL
    A0A6J1ECC9
    Conserved Domains (1) summary
    cl28622
    Location:130 → 651
    PLN02870; Probable galacturonosyltransferase

  3. XM_023068646.1 → XP_022924414.1  polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X4

    UniProtKB/TrEMBL
    A0A6J1E937
    Conserved Domains (1) summary
    cl28622
    Location:108 → 627
    PLN02870; Probable galacturonosyltransferase

  4. XM_023068642.1 → XP_022924410.1  polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X1

    UniProtKB/TrEMBL
    A0A6J1EEY0
    Conserved Domains (1) summary
    cl28622
    Location:165 → 694
    PLN02870; Probable galacturonosyltransferase

  5. XM_023068643.1 → XP_022924411.1  polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X1

    UniProtKB/TrEMBL
    A0A6J1EEY0
    Conserved Domains (1) summary
    cl28622
    Location:165 → 694
    PLN02870; Probable galacturonosyltransferase

  6. XM_023068647.1 → XP_022924415.1  polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X5

    UniProtKB/TrEMBL
    A0A6J1EEY5
    Conserved Domains (1) summary
    cl28622
    Location:59 → 588
    PLN02870; Probable galacturonosyltransferase

  7. XM_023068648.1 → XP_022924416.1  polygalacturonate 4-alpha-galacturonosyltransferase-like isoform X5

    UniProtKB/TrEMBL
    A0A6J1EEY5
    Conserved Domains (1) summary
    cl28622
    Location:59 → 588
    PLN02870; Probable galacturonosyltransferase
Nucleotide Protein
Heading Accession and Version

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