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LOC111431709 starch synthase 3, chloroplastic/amyloplastic [ Cucurbita moschata (crookneck pumpkin) ]

Gene ID: 111431709, updated on 18-Sep-2024

Summary

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Gene symbol
LOC111431709
Gene description
starch synthase 3, chloroplastic/amyloplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita moschata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111431709 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268552.1 (27853..39020)

NW_019268552.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At1g11710, mitochondrial Neighboring gene ATP synthase gamma chain, chloroplastic Neighboring gene uncharacterized LOC111431737 Neighboring gene probable beta-1,3-galactosyltransferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019268552 Unplaced Scaffold Reference Cmos_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
starch synthase 3, chloroplastic/amyloplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cmos_1.0

Genomic

  1. NW_019268552.1 Reference Cmos_1.0

    Range
    27853..39020
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023068420.1 → XP_022924188.1  starch synthase 3, chloroplastic/amyloplastic

    UniProtKB/TrEMBL
    A0A6J1EBP2
    Conserved Domains (1) summary
    PLN02316
    Location:80 → 1144
    PLN02316; synthase/transferase
Nucleotide Protein
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