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LOC111429266 irregular chiasm C-roughest protein-like [ Onthophagus taurus ]

Gene ID: 111429266, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111429266
Gene description
irregular chiasm C-roughest protein-like
See related
EnsemblRapid:LOC111429266
Gene type
protein coding
RefSeq status
MODEL
Organism
Onthophagus taurus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Scarabaeiformia; Scarabaeidae; Scarabaeinae; Onthophagini; Onthophagus
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Genomic context

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See LOC111429266 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Otau_2.0 (GCF_000648695.1) Unplaced Scaffold NW_019280414.1 (452002..526448)

NW_019280414.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111429273 Neighboring gene uncharacterized LOC111429278 Neighboring gene uncharacterized LOC111429285 Neighboring gene cyclin-C

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019280414 Unplaced Scaffold Reference Otau_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
irregular chiasm C-roughest protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Onthophagus taurus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otau_2.0

Genomic

  1. NW_019280414.1 Reference Otau_2.0

    Range
    452002..526448
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023065136.1 → XP_022920904.1  irregular chiasm C-roughest protein-like

    Related
    XP_022920904.1, XM_023065136.1
    Conserved Domains (5) summary
    smart00410
    Location:33 → 127
    IG_like; Immunoglobulin like
    pfam08205
    Location:134 → 222
    C2-set_2; CD80-like C2-set immunoglobulin domain
    pfam13895
    Location:342 → 399
    Ig_2; Immunoglobulin domain
    pfam13927
    Location:243 → 310
    Ig_3; Immunoglobulin domain
    cl11960
    Location:409 → 504
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases