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LOC111427966 laminin subunit alpha-1 [ Onthophagus taurus ]

Gene ID: 111427966, updated on 10-May-2024

Summary

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Gene symbol
LOC111427966
Gene description
laminin subunit alpha-1
See related
EnsemblRapid:LOC111427966
Gene type
protein coding
RefSeq status
MODEL
Organism
Onthophagus taurus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Scarabaeiformia; Scarabaeidae; Scarabaeinae; Onthophagini; Onthophagus
Orthologs
fruit fly all
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Genomic context

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See LOC111427966 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
27
Annotation release Status Assembly Chr Location
100 current Otau_2.0 (GCF_000648695.1) Unplaced Scaffold NW_019286135.1 (2588854..2650988, complement)

NW_019286135.1Genomic Context describing neighboring genes Neighboring gene transcription initiation factor TFIID subunit 6-like Neighboring gene Recombination repair protein 1 Neighboring gene lost and found Neighboring gene uncharacterized LOC111427860

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019286135 Unplaced Scaffold Reference Otau_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
laminin subunit alpha-1; laminin subunit alpha-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Onthophagus taurus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Otau_2.0

Genomic

  1. NW_019286135.1 Reference Otau_2.0

    Range
    2588854..2650988 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023063343.1 → XP_022919111.1  laminin subunit alpha-1 isoform X1

    Related
    XP_022919111.1, XM_023063343.1
    Conserved Domains (7) summary
    smart00180
    Location:1053 → 1098
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:750 → 797
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2982 → 3133
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:957 → 1005
    Laminin_EGF; Laminin EGF domain
    pfam00052
    Location:1325 → 1475
    Laminin_B; Laminin B (Domain IV)
    pfam00055
    Location:69 → 291
    Laminin_N; Laminin N-terminal (Domain VI)
    cl25732
    Location:1711 → 2225
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_023063344.1 → XP_022919112.1  laminin subunit alpha-2 isoform X2

    Related
    XP_022919112.1, XM_023063344.1
    Conserved Domains (7) summary
    smart00180
    Location:451 → 496
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    cd00055
    Location:148 → 195
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2380 → 2531
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:355 → 403
    Laminin_EGF; Laminin EGF domain
    pfam00052
    Location:723 → 873
    Laminin_B; Laminin B (Domain IV)
    cl25602
    Location:1528 → 1777
    DUF3552; Domain of unknown function (DUF3552)
    cl25732
    Location:1109 → 1623
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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