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LOC111358503 delta-sarcoglycan-like [ Spodoptera litura ]

Gene ID: 111358503, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111358503
Gene description
delta-sarcoglycan-like
See related
EnsemblRapid:ENSSLIG00005016275
Gene type
protein coding
RefSeq status
MODEL
Organism
Spodoptera litura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Amphipyrinae; Spodoptera
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Genomic context

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See LOC111358503 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
7
Annotation release Status Assembly Chr Location
100 current ASM270686v1 (GCF_002706865.1) 27 NC_036213.1 (6402307..6432394, complement)

Chromosome 27 - NC_036213.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111358536 Neighboring gene uncharacterized LOC111358546 Neighboring gene delta-sarcoglycan-like Neighboring gene ER membrane protein complex subunit 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036213.1 Chromosome 27 Reference ASM270686v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Spodoptera litura Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM270686v1 Primary Assembly

Genomic

  1. NC_036213.1 Reference ASM270686v1 Primary Assembly

    Range
    6402307..6432394 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022973671.1 → XP_022829439.1  delta-sarcoglycan-like

    UniProtKB/TrEMBL
    A0A9J7IXR3
    Related
    ENSSLIP00005021837.1, ENSSLIT00005027629.1
    Conserved Domains (1) summary
    pfam04790
    Location:64 → 323
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases