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LOC111346890 calcium channel flower-like [ Stylophora pistillata ]

Gene ID: 111346890, updated on 7-Dec-2023

Summary

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Gene symbol
LOC111346890
Gene description
calcium channel flower-like
Locus tag
AWC38_SpisGene23244
See related
EnsemblRapid:LOC111346890
Gene type
protein coding
RefSeq status
MODEL
Organism
Stylophora pistillata
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Stylophora
Also known as
flower
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Genomic context

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See LOC111346890 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Stylophora pistillata v1 (GCF_002571385.1) Unplaced Scaffold NW_019218988.1 (12543..19385)

NW_019218988.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-associated domain-containing protein 1-like Neighboring gene E3 ubiquitin-protein ligase LRSAM1-like Neighboring gene uncharacterized LOC111346889

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019218988 Unplaced Scaffold Reference Stylophora pistillata v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium channel flower-like
Names
Calcium channel flower

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stylophora pistillata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stylophora pistillata v1 Primary Assembly

Genomic

  1. NW_019218988.1 Reference Stylophora pistillata v1 Primary Assembly

    Range
    12543..19385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022954149.1 → XP_022809884.1  calcium channel flower-like

    UniProtKB/TrEMBL
    A0A2B4R7E9
    Related
    XP_022809884.1, XM_022954149.1
    Conserved Domains (1) summary
    pfam10233
    Location:21 → 131
    Cg6151-P; Uncharacterized conserved protein CG6151-P

RNA

  1. XR_002696450.1 RNA Sequence

    Related
    XR_002696450.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases