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LOC111325558 protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like [ Stylophora pistillata ]

Gene ID: 111325558, updated on 7-Dec-2023

Summary

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Gene symbol
LOC111325558
Gene description
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like
Locus tag
AWC38_SpisGene6306
See related
EnsemblRapid:LOC111325558
Gene type
protein coding
RefSeq status
MODEL
Organism
Stylophora pistillata
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Stylophora
Also known as
POMGNT1
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC111325558 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Stylophora pistillata v1 (GCF_002571385.1) Unplaced Scaffold NW_019217857.1 (22792..31101, complement)

NW_019217857.1Genomic Context describing neighboring genes Neighboring gene alcohol dehydrogenase [NADP(+)]-like Neighboring gene UDP-glucuronosyltransferase 1-6-like Neighboring gene uncharacterized LOC111325625 Neighboring gene uncharacterized LOC111325568 Neighboring gene tyrosine-protein kinase BTK-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019217857 Unplaced Scaffold Reference Stylophora pistillata v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of microRNAs in the coral Stylophora pistillata. Liew YJ, et al. PLoS One, 2014. PMID 24658574, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like
Names
Protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stylophora pistillata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stylophora pistillata v1 Primary Assembly

Genomic

  1. NW_019217857.1 Reference Stylophora pistillata v1 Primary Assembly

    Range
    22792..31101 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022929384.1 → XP_022785119.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like

    Related
    XP_022785119.1, XM_022929384.1
    Conserved Domains (2) summary
    cl11394
    Location:281 → 529
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    cl19122
    Location:76 → 226
    PANDER_like; Domains similar to the Pancreatic-derived factor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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