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LOC111325254 laminin subunit alpha-2-like [ Stylophora pistillata ]

Gene ID: 111325254, updated on 7-Dec-2023

Summary

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Gene symbol
LOC111325254
Gene description
laminin subunit alpha-2-like
See related
EnsemblRapid:LOC111325254
Gene type
protein coding
RefSeq status
MODEL
Organism
Stylophora pistillata
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Stylophora
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Genomic context

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See LOC111325254 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
50
Annotation release Status Assembly Chr Location
100 current Stylophora pistillata v1 (GCF_002571385.1) Unplaced Scaffold NW_019217787.1 (940996..984966, complement)

NW_019217787.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111325797 Neighboring gene eukaryotic translation initiation factor 3 subunit J-like Neighboring gene uncharacterized LOC111325262 Neighboring gene laminin subunit alpha-like Neighboring gene multiple C2 and transmembrane domain-containing protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019217787 Unplaced Scaffold Reference Stylophora pistillata v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in basement membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: laminin subunit alpha-2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stylophora pistillata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stylophora pistillata v1 Primary Assembly

Genomic

  1. NW_019217787.1 Reference Stylophora pistillata v1 Primary Assembly

    Range
    940996..984966 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022929029.1 → XP_022784764.1  LOW QUALITY PROTEIN: laminin subunit alpha-2-like

    UniProtKB/TrEMBL
    A0A2B4T0V3
    Related
    XP_022784764.1, XM_022929029.1
    Conserved Domains (7) summary
    smart00180
    Location:603 → 648
    EGF_Lam; Laminin-type epidermal growth factor-like domai
    smart00282
    Location:2032 → 2162
    LamG; Laminin G domain
    cd00055
    Location:341 → 393
    EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
    cd00110
    Location:2208 → 2369
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    pfam00053
    Location:775 → 822
    Laminin_EGF; Laminin EGF domain
    pfam00168
    Location:1185 → 1297
    C2; C2 domain
    cl02806
    Location:3 → 137
    Laminin_N; Laminin N-terminal (Domain VI)
Nucleotide Protein
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