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LOC111296426 sulfoquinovosyl transferase SQD2-like [ Durio zibethinus ]

Gene ID: 111296426, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111296426
Gene description
sulfoquinovosyl transferase SQD2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Durio zibethinus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Genomic context

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See LOC111296426 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Duzib1.0 (GCF_002303985.1) Unplaced Scaffold NW_019168492.1 (25336696..25341261, complement)

NW_019168492.1Genomic Context describing neighboring genes Neighboring gene laccase-4-like Neighboring gene transcription factor DIVARICATA-like Neighboring gene josephin-like protein Neighboring gene 26S proteasome non-ATPase regulatory subunit 7 homolog A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019168492 Unplaced Scaffold Reference Duzib1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Durio zibethinus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Duzib1.0

Genomic

  1. NW_019168492.1 Reference Duzib1.0

    Range
    25336696..25341261 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022890725.1 → XP_022746460.1  sulfoquinovosyl transferase SQD2-like isoform X3

    UniProtKB/TrEMBL
    A0A6P5Z1M0
    Conserved Domains (1) summary
    PLN02871
    Location:1 → 418
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

  2. XM_022890722.1 → XP_022746457.1  sulfoquinovosyl transferase SQD2-like isoform X1

    UniProtKB/TrEMBL
    A0A6P5Z1H7
    Conserved Domains (1) summary
    PLN02871
    Location:1 → 437
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

  3. XM_022890724.1 → XP_022746459.1  sulfoquinovosyl transferase SQD2-like isoform X2

    UniProtKB/TrEMBL
    A0A6P5Z0Y7
    Conserved Domains (1) summary
    PLN02871
    Location:1 → 433
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

  4. XM_022890726.1 → XP_022746461.1  sulfoquinovosyl transferase SQD2-like isoform X4

    UniProtKB/TrEMBL
    A0A6P5Z2C3
    Conserved Domains (1) summary
    PLN02871
    Location:1 → 374
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Nucleotide Protein
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