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PIG-Z phosphatidylinositol glycan anchor biosynthesis class Z [ Varroa destructor (honeybee mite) ]

Gene ID: 111249515, updated on 6-Jul-2024

Summary

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Gene symbol
PIG-Z
Gene description
phosphatidylinositol glycan anchor biosynthesis class Z
Gene type
protein coding
RefSeq status
MODEL
Organism
Varroa destructor
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Mesostigmata; Gamasina; Dermanyssoidea; Varroidae; Varroa
Orthologs
fruit fly all
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Genomic context

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See PIG-Z in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Vdes_3.0 (GCF_002443255.1) Unplaced Scaffold NW_019211457.1 (30140811..30158294, complement)

NW_019211457.1Genomic Context describing neighboring genes Neighboring gene inactive tyrosine-protein kinase 7-like Neighboring gene uncharacterized LOC111249518 Neighboring gene fuzzy planar cell polarity protein-like protein Neighboring gene 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon-like Neighboring gene choline/ethanolamine kinase-like Neighboring gene sialin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019211457 Unplaced Scaffold Reference Vdes_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varroa destructor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vdes_3.0 Primary Assembly

Genomic

  1. NW_019211457.1 Reference Vdes_3.0 Primary Assembly

    Range
    30140811..30158294 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022803477.1 → XP_022659212.1  GPI mannosyltransferase 4-like

    UniProtKB/TrEMBL
    A0A7M7K224
    Conserved Domains (1) summary
    cl21590
    Location:10 → 436
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_022803474.1 → XP_022659209.1  GPI mannosyltransferase 4-like

    UniProtKB/TrEMBL
    A0A7M7K224
    Conserved Domains (1) summary
    cl21590
    Location:10 → 436
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  3. XM_022803475.1 → XP_022659210.1  GPI mannosyltransferase 4-like

    UniProtKB/TrEMBL
    A0A7M7K224
    Conserved Domains (1) summary
    cl21590
    Location:10 → 436
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  4. XM_022803473.1 → XP_022659208.1  GPI mannosyltransferase 4-like

    UniProtKB/TrEMBL
    A0A7M7K224
    Conserved Domains (1) summary
    cl21590
    Location:10 → 436
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  5. XM_022803476.1 → XP_022659211.1  GPI mannosyltransferase 4-like

    UniProtKB/TrEMBL
    A0A7M7K224
    Conserved Domains (1) summary
    cl21590
    Location:10 → 436
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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