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LOC111248263 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like [ Varroa destructor (honeybee mite) ]

Gene ID: 111248263, updated on 7-Dec-2023

Summary

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Gene symbol
LOC111248263
Gene description
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Varroa destructor
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Mesostigmata; Gamasina; Dermanyssoidea; Varroidae; Varroa
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Genomic context

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See LOC111248263 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current Vdes_3.0 (GCF_002443255.1) Unplaced Scaffold NW_019211456.1 (46249437..46304145, complement)

NW_019211456.1Genomic Context describing neighboring genes Neighboring gene organic cation transporter protein-like Neighboring gene diacylglycerol kinase theta-like Neighboring gene mucin-19-like Neighboring gene cuticle protein 38-like Neighboring gene uncharacterized LOC111248266 Neighboring gene uncharacterized LOC111248265 Neighboring gene tolloid-like protein 1 Neighboring gene uncharacterized LOC111246237 Neighboring gene uncharacterized LOC111246238

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019211456 Unplaced Scaffold Reference Vdes_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varroa destructor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vdes_3.0 Primary Assembly

Genomic

  1. NW_019211456.1 Reference Vdes_3.0 Primary Assembly

    Range
    46249437..46304145 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022800317.1 → XP_022656052.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X5

    UniProtKB/TrEMBL
    A0A7M7JRE5

  2. XM_022800304.1 → XP_022656039.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A7M7JTV1
    Conserved Domains (1) summary
    cl21608
    Location:182 → 270
    Galactosyl_T; Galactosyltransferase

  3. XM_022800299.1 → XP_022656034.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A7M7JS05
    Conserved Domains (1) summary
    cl21608
    Location:208 → 296
    Galactosyl_T; Galactosyltransferase

  4. XM_022800303.1 → XP_022656038.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X3

    UniProtKB/TrEMBL
    A0A7M7K5P9
    Conserved Domains (1) summary
    cl21608
    Location:185 → 273
    Galactosyl_T; Galactosyltransferase

  5. XM_022800302.1 → XP_022656037.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X2

    UniProtKB/TrEMBL
    A0A7M7MEG7
    Conserved Domains (1) summary
    cl21608
    Location:186 → 274
    Galactosyl_T; Galactosyltransferase

  6. XM_022800298.1 → XP_022656033.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A7M7JS05
    Conserved Domains (1) summary
    cl21608
    Location:208 → 296
    Galactosyl_T; Galactosyltransferase

  7. XM_022800316.1 → XP_022656051.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A7M7JTV1
    Conserved Domains (1) summary
    cl21608
    Location:182 → 270
    Galactosyl_T; Galactosyltransferase

  8. XM_022800296.1 → XP_022656031.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A7M7JS05
    Conserved Domains (1) summary
    cl21608
    Location:208 → 296
    Galactosyl_T; Galactosyltransferase

  9. XM_022800313.1 → XP_022656048.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A7M7JTV1
    Conserved Domains (1) summary
    cl21608
    Location:182 → 270
    Galactosyl_T; Galactosyltransferase

  10. XM_022800310.1 → XP_022656045.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A7M7JTV1
    Conserved Domains (1) summary
    cl21608
    Location:182 → 270
    Galactosyl_T; Galactosyltransferase

  11. XM_022800314.1 → XP_022656049.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A7M7JTV1
    Conserved Domains (1) summary
    cl21608
    Location:182 → 270
    Galactosyl_T; Galactosyltransferase

  12. XM_022800308.1 → XP_022656043.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A7M7JTV1
    Conserved Domains (1) summary
    cl21608
    Location:182 → 270
    Galactosyl_T; Galactosyltransferase

  13. XM_022800307.1 → XP_022656042.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A7M7JTV1
    Conserved Domains (1) summary
    cl21608
    Location:182 → 270
    Galactosyl_T; Galactosyltransferase

  14. XM_022800315.1 → XP_022656050.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A7M7JTV1
    Conserved Domains (1) summary
    cl21608
    Location:182 → 270
    Galactosyl_T; Galactosyltransferase

  15. XM_022800311.1 → XP_022656046.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A7M7JTV1
    Conserved Domains (1) summary
    cl21608
    Location:182 → 270
    Galactosyl_T; Galactosyltransferase

  16. XM_022800318.1 → XP_022656053.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X6

    UniProtKB/TrEMBL
    A0A7M7JRE2
    Conserved Domains (1) summary
    cl21608
    Location:150 → 238
    Galactosyl_T; Galactosyltransferase

  17. XM_022800319.1 → XP_022656054.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X6

    UniProtKB/TrEMBL
    A0A7M7JRE2
    Conserved Domains (1) summary
    cl21608
    Location:150 → 238
    Galactosyl_T; Galactosyltransferase

  18. XM_022800306.1 → XP_022656041.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A7M7JTV1
    Conserved Domains (1) summary
    cl21608
    Location:182 → 270
    Galactosyl_T; Galactosyltransferase

  19. XM_022800305.1 → XP_022656040.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A7M7JTV1
    Conserved Domains (1) summary
    cl21608
    Location:182 → 270
    Galactosyl_T; Galactosyltransferase

  20. XM_022800309.1 → XP_022656044.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X4

    UniProtKB/TrEMBL
    A0A7M7JTV1
    Conserved Domains (1) summary
    cl21608
    Location:182 → 270
    Galactosyl_T; Galactosyltransferase

  21. XM_022800300.1 → XP_022656035.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A7M7JS05
    Conserved Domains (1) summary
    cl21608
    Location:208 → 296
    Galactosyl_T; Galactosyltransferase

  22. XM_022800297.1 → XP_022656032.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A7M7JS05
    Conserved Domains (1) summary
    cl21608
    Location:208 → 296
    Galactosyl_T; Galactosyltransferase

  23. XM_022800320.1 → XP_022656055.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like isoform X7

    UniProtKB/TrEMBL
    A0A7M7JUY0
    Conserved Domains (1) summary
    cl21608
    Location:208 → 272
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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