U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC111246884 beta-1,4-mannosyltransferase egh-like [ Varroa destructor (honeybee mite) ]

Gene ID: 111246884, updated on 1-Jul-2024

Summary

Go to the top of the page Help
Gene symbol
LOC111246884
Gene description
beta-1,4-mannosyltransferase egh-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Varroa destructor
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Mesostigmata; Gamasina; Dermanyssoidea; Varroidae; Varroa
Orthologs
fruit fly all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC111246884 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Vdes_3.0 (GCF_002443255.1) Unplaced Scaffold NW_019211454.1 (54763060..54776527)

NW_019211454.1Genomic Context describing neighboring genes Neighboring gene multiple epidermal growth factor-like domains protein 9 Neighboring gene glycine-rich RNA-binding protein 3, mitochondrial-like Neighboring gene collagen alpha-1(I) chain-like Neighboring gene mediator complex subunit 19 Neighboring gene activator of SUMO 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019211454 Unplaced Scaffold Reference Vdes_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,4-mannosyltransferase egh-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Varroa destructor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vdes_3.0 Primary Assembly

Genomic

  1. NW_019211454.1 Reference Vdes_3.0 Primary Assembly

    Range
    54763060..54776527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022797243.1 → XP_022652978.1  beta-1,4-mannosyltransferase egh-like

    UniProtKB/TrEMBL
    A0A7M7JYL5
    Conserved Domains (1) summary
    pfam13632
    Location:240 → 416
    Glyco_trans_2_3; Glycosyl transferase family group 2

  2. XM_022797235.1 → XP_022652970.1  beta-1,4-mannosyltransferase egh-like

    UniProtKB/TrEMBL
    A0A7M7JYL5
    Conserved Domains (1) summary
    pfam13632
    Location:240 → 416
    Glyco_trans_2_3; Glycosyl transferase family group 2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases