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LOC111244938 protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like [ Varroa destructor (honeybee mite) ]

Gene ID: 111244938, updated on 7-Dec-2023

Summary

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Gene symbol
LOC111244938
Gene description
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Varroa destructor
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Mesostigmata; Gamasina; Dermanyssoidea; Varroidae; Varroa
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Genomic context

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See LOC111244938 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Vdes_3.0 (GCF_002443255.1) Unplaced Scaffold NW_019211455.1 (32986026..33084277, complement)

NW_019211455.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111244940 Neighboring gene ribosomal protein L14 Neighboring gene uncharacterized LOC111244937 Neighboring gene adenylyl cyclase-associated protein 1 Neighboring gene uncharacterized LOC111244948 Neighboring gene uncharacterized LOC111244579 Neighboring gene GDP-mannose pyrophosphorylase B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019211455 Unplaced Scaffold Reference Vdes_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Varroa destructor Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vdes_3.0 Primary Assembly

Genomic

  1. NW_019211455.1 Reference Vdes_3.0 Primary Assembly

    Range
    32986026..33084277 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022792549.1 → XP_022648284.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X2

    UniProtKB/TrEMBL
    A0A7M7JM46
    Conserved Domains (2) summary
    cd13937
    Location:93 → 231
    PANDER_GnT-1_2_like; PANDER-like domain of N-acetylglucosaminyltransferases
    cl11394
    Location:289 → 554
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_022792548.1 → XP_022648283.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A7M7MAQ1
    Conserved Domains (2) summary
    cd13937
    Location:93 → 231
    PANDER_GnT-1_2_like; PANDER-like domain of N-acetylglucosaminyltransferases
    cl11394
    Location:289 → 653
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_022792547.1 → XP_022648282.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A7M7MAQ1
    Conserved Domains (2) summary
    cd13937
    Location:93 → 231
    PANDER_GnT-1_2_like; PANDER-like domain of N-acetylglucosaminyltransferases
    cl11394
    Location:289 → 653
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  4. XM_022792550.1 → XP_022648285.1  protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1-like isoform X3

    UniProtKB/TrEMBL
    A0A7M7M4H1
    Conserved Domains (2) summary
    cl11394
    Location:168 → 532
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    cl19122
    Location:1 → 110
    PANDER_like; Domains similar to the Pancreatic-derived factor
Nucleotide Protein
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