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alg8 ALG8 alpha-1,3-glucosyltransferase [ Seriola dumerili (greater amberjack) ]

Gene ID: 111239529, updated on 18-Sep-2024

Summary

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Gene symbol
alg8
Gene description
ALG8 alpha-1,3-glucosyltransferase
See related
Ensembl:ENSSDUG00000023396
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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See alg8 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019177182.1 (549622..556670, complement)

NW_019177182.1Genomic Context describing neighboring genes Neighboring gene duboraya Neighboring gene guanylate cyclase activator 1d Neighboring gene coiled-coil domain containing 90B Neighboring gene PCF11 cleavage and polyadenylation factor subunit Neighboring gene nuclear cap binding subunit 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019177182 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019177182.1 Reference Sdu_1.0 Primary Assembly

    Range
    549622..556670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022769427.1 → XP_022625148.1  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X3

    Conserved Domains (1) summary
    pfam03155
    Location:19 → 491
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family

  2. XM_022769426.1 → XP_022625147.1  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2

    Conserved Domains (1) summary
    pfam03155
    Location:19 → 503
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family

  3. XM_022769425.1 → XP_022625146.1  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A3B4VPT0
    Related
    ENSSDUP00000032559.1, ENSSDUT00000033117.1
    Conserved Domains (1) summary
    pfam03155
    Location:19 → 505
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family
Nucleotide Protein
Heading Accession and Version

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