U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

wasf1 WASP family member 1 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111239134, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
wasf1
Gene description
WASP family member 1
See related
Ensembl:ENSSDUG00000017280
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See wasf1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174280.1 (13340641..13397156, complement)

NW_019174280.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 167 Neighboring gene kinesin family member 25 Neighboring gene cell division cycle 40 homolog (S. cerevisiae) Neighboring gene methyltransferase like 24

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019174280 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Arp2/3 complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase A regulatory subunit binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of Arp2/3 complex-mediated actin nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
wiskott-Aldrich syndrome protein family member 1
Names
WAS protein family member 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174280.1 Reference Sdu_1.0 Primary Assembly

    Range
    13340641..13397156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022768944.1 → XP_022624665.1  wiskott-Aldrich syndrome protein family member 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B4UZ21, A0A3B4UZ47
    Related
    ENSSDUP00000023788.1, ENSSDUT00000024232.1
    Conserved Domains (1) summary
    pfam02205
    Location:491 → 518
    WH2; WH2 motif

  2. XM_022768953.1 → XP_022624674.1  wiskott-Aldrich syndrome protein family member 1 isoform X2

    UniProtKB/TrEMBL
    A0A3B4UZ47
    Conserved Domains (1) summary
    pfam02205
    Location:431 → 458
    WH2; WH2 motif

  3. XM_022768936.1 → XP_022624657.1  wiskott-Aldrich syndrome protein family member 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B4UZ21, A0A3B4UZ47
    Conserved Domains (1) summary
    pfam02205
    Location:491 → 518
    WH2; WH2 motif
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.