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ugcg UDP-glucose ceramide glucosyltransferase [ Seriola dumerili (greater amberjack) ]

Gene ID: 111238820, updated on 15-Mar-2024

Summary

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Gene symbol
ugcg
Gene description
UDP-glucose ceramide glucosyltransferase
See related
Ensembl:ENSSDUG00000002652
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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See ugcg in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019175928.1 (39839..46410, complement)

NW_019175928.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111238816 Neighboring gene hydroxysteroid dehydrogenase like 2 Neighboring gene polypyrimidine tract binding protein 3 Neighboring gene molybdenum cofactor synthesis 2 Neighboring gene mannosidase alpha class 2A member 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019175928 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glucosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019175928.1 Reference Sdu_1.0 Primary Assembly

    Range
    39839..46410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022768510.1 → XP_022624231.1  ceramide glucosyltransferase

    UniProtKB/TrEMBL
    A0A3B4TBK8
    Related
    ENSSDUP00000003496.1, ENSSDUT00000003574.1
    Conserved Domains (1) summary
    cd02520
    Location:53 → 281
    Glucosylceramide_synthase; Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis
Nucleotide Protein
Heading Accession and Version

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