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LOC111237265 beta-1,4-galactosyltransferase 1-like [ Seriola dumerili (greater amberjack) ]

Gene ID: 111237265, updated on 21-Dec-2023

Summary

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Gene symbol
LOC111237265
Gene description
beta-1,4-galactosyltransferase 1-like
See related
Ensembl:ENSSDUG00000004229
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
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Genomic context

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See LOC111237265 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019175077.1 (1793066..1795895)

NW_019175077.1Genomic Context describing neighboring genes Neighboring gene peroxisomal biogenesis factor 2 Neighboring gene zinc finger homeobox 4 Neighboring gene APC membrane recruitment protein 2 Neighboring gene myotubularin related protein 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019175077 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019175077.1 Reference Sdu_1.0 Primary Assembly

    Range
    1793066..1795895
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022766291.1 → XP_022622012.1  beta-1,4-galactosyltransferase 1-like

    UniProtKB/TrEMBL
    A0A3B4THS7
    Related
    ENSSDUP00000005746.1, ENSSDUT00000005860.1
    Conserved Domains (1) summary
    cd00899
    Location:126 → 344
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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