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cep104 centrosomal protein 104 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111236998, updated on 15-Mar-2024

Summary

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Gene symbol
cep104
Gene description
centrosomal protein 104
See related
Ensembl:ENSSDUG00000014643
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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See cep104 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019175055.1 (818647..856953)

NW_019175055.1Genomic Context describing neighboring genes Neighboring gene L-rhamnose-binding lectin CSL1-like Neighboring gene leucine rich repeat containing 47 Neighboring gene chromosome unknown C1orf174 homolog Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019175055 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019175055.1 Reference Sdu_1.0 Primary Assembly

    Range
    818647..856953
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022765929.1 → XP_022621650.1  centrosomal protein of 104 kDa

    UniProtKB/TrEMBL
    A0A3B4UP44
    Related
    ENSSDUP00000020123.1, ENSSDUT00000020476.1
    Conserved Domains (1) summary
    cl26464
    Location:313 → 453
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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