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alg2 ALG2 alpha-1,3/1,6-mannosyltransferase [ Seriola dumerili (greater amberjack) ]

Gene ID: 111236927, updated on 18-Sep-2024

Summary

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Gene symbol
alg2
Gene description
ALG2 alpha-1,3/1,6-mannosyltransferase
See related
Ensembl:ENSSDUG00000012220
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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See alg2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019175013.1 (39595..44789, complement)

NW_019175013.1Genomic Context describing neighboring genes Neighboring gene ferric chelate reductase 1 like Neighboring gene retinoic acid receptor responder protein 3-like Neighboring gene SEC61 translocon subunit beta Neighboring gene nuclear receptor subfamily 4, group A, member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019175013 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alpha-1,3-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3/1,6-mannosyltransferase ALG2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019175013.1 Reference Sdu_1.0 Primary Assembly

    Range
    39595..44789 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022765849.1 → XP_022621570.1  alpha-1,3/1,6-mannosyltransferase ALG2

    UniProtKB/TrEMBL
    A0A3B4UGB1
    Conserved Domains (1) summary
    cd03805
    Location:3 → 396
    GT1_ALG2_like; This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2) ...

  2. XM_022765848.1 → XP_022621569.1  alpha-1,3/1,6-mannosyltransferase ALG2

    UniProtKB/TrEMBL
    A0A3B4UGB1
    Conserved Domains (1) summary
    cd03805
    Location:3 → 396
    GT1_ALG2_like; This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2) ...

  3. XM_022765850.1 → XP_022621571.1  alpha-1,3/1,6-mannosyltransferase ALG2

    UniProtKB/TrEMBL
    A0A3B4UGB1
    Related
    ENSSDUP00000016740.1, ENSSDUT00000017046.1
    Conserved Domains (1) summary
    cd03805
    Location:3 → 396
    GT1_ALG2_like; This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2) ...
Nucleotide Protein
Heading Accession and Version

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