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gal3st2 galactose-3-O-sulfotransferase 2 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111235150, updated on 15-Mar-2024

Summary

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Gene symbol
gal3st2
Gene description
galactose-3-O-sulfotransferase 2
See related
Ensembl:ENSSDUG00000008033
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
zebrafish all
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Genomic context

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See gal3st2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174732.1 (192656..210373)

NW_019174732.1Genomic Context describing neighboring genes Neighboring gene EF-hand domain family, member D1 Neighboring gene potassium inwardly rectifying channel subfamily J member 13 Neighboring gene FAT atypical cadherin 3a Neighboring gene melatonin receptor type 1Ba

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174732 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactose-3-O-sulfotransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174732.1 Reference Sdu_1.0 Primary Assembly

    Range
    192656..210373
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022763486.1 → XP_022619207.1  galactose-3-O-sulfotransferase 2-like

    UniProtKB/TrEMBL
    A0A3B4TZ46
    Related
    ENSSDUP00000010985.1, ENSSDUT00000011188.1
    Conserved Domains (1) summary
    cl22970
    Location:141 → 480
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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