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iqgap3 IQ motif containing GTPase activating protein 3 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111234089, updated on 15-Mar-2024

Summary

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Gene symbol
iqgap3
Gene description
IQ motif containing GTPase activating protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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See iqgap3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
38
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174690.1 (260093..275283, complement)

NW_019174690.1Genomic Context describing neighboring genes Neighboring gene purine nucleoside phosphorylase 4b Neighboring gene ankyrin repeat domain 34A Neighboring gene gonadotropin-releasing hormone II receptor-like Neighboring gene immunoglobulin superfamily DCC subclass member 3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174690 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras GTPase-activating-like protein IQGAP3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174690.1 Reference Sdu_1.0 Primary Assembly

    Range
    260093..275283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022762005.1 → XP_022617726.1  ras GTPase-activating-like protein IQGAP3

    UniProtKB/TrEMBL
    A0A3B4UMR6
    Conserved Domains (2) summary
    cl02569
    Location:986 → 1340
    RasGAP; Ras GTPase Activating Domain
    cl27227
    Location:872 → 1643
    RasGAP_C; RasGAP C-terminus
Nucleotide Protein
Heading Accession and Version

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