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b4galt2 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111230961, updated on 15-Mar-2024

Summary

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Gene symbol
b4galt2
Gene description
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
See related
Ensembl:ENSSDUG00000015568
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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See b4galt2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174546.1 (4505174..4647993, complement)

NW_019174546.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111231214 Neighboring gene coiled-coil domain containing 24 Neighboring gene uncharacterized LOC111230964 Neighboring gene zinc finger protein 32-like Neighboring gene ATPase H+ transporting V0 subunit b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174546 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174546.1 Reference Sdu_1.0 Primary Assembly

    Range
    4505174..4647993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022757865.1 → XP_022613586.1  beta-1,4-galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A3B4UU67
    Related
    ENSSDUP00000021405.1, ENSSDUT00000021796.1
    Conserved Domains (1) summary
    cd00899
    Location:154 → 372
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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