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dpy19l4 dpy-19 like 4 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111230575, updated on 21-Dec-2023

Summary

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Gene symbol
dpy19l4
Gene description
dpy-19 like 4
See related
Ensembl:ENSSDUG00000009264
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
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Genomic context

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See dpy19l4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174528.1 (958908..965921, complement)

NW_019174528.1Genomic Context describing neighboring genes Neighboring gene T-cell differentiation antigen CD6-like Neighboring gene G1/S-specific cyclin-E2-like Neighboring gene integrator complex subunit 8 Neighboring gene nucleolin-like Neighboring gene death-associated protein kinase 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174528 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174528.1 Reference Sdu_1.0 Primary Assembly

    Range
    958908..965921 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022757356.1 → XP_022613077.1  probable C-mannosyltransferase DPY19L4

    UniProtKB/TrEMBL
    A0A3B4U2J8, A0A3B4U351
    Related
    ENSSDUP00000012767.1, ENSSDUT00000012998.1
    Conserved Domains (1) summary
    pfam10034
    Location:105 → 759
    Dpy19; Q-cell neuroblast polarisation
Nucleotide Protein
Heading Accession and Version

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