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alg6 ALG6 alpha-1,3-glucosyltransferase [ Seriola dumerili (greater amberjack) ]

Gene ID: 111229751, updated on 18-Sep-2024

Summary

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Gene symbol
alg6
Gene description
ALG6 alpha-1,3-glucosyltransferase
See related
Ensembl:ENSSDUG00000013498
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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See alg6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174257.1 (9384353..9400946, complement)

NW_019174257.1Genomic Context describing neighboring genes Neighboring gene phosphoglucomutase 1 Neighboring gene EF-hand calcium binding domain 7 Neighboring gene forkhead box D3 Neighboring gene autophagy related 4C, cysteine peptidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174257 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174257.1 Reference Sdu_1.0 Primary Assembly

    Range
    9384353..9400946 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022756256.1 → XP_022611977.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase

    UniProtKB/TrEMBL
    A0A3B4UJF3
    Related
    ENSSDUP00000018492.1, ENSSDUT00000018827.1
    Conserved Domains (1) summary
    pfam03155
    Location:32 → 481
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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