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fut7 fucosyltransferase 7 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111228742, updated on 8-Aug-2024

Summary

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Gene symbol
fut7
Gene description
fucosyltransferase 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
zebrafish all
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Genomic context

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See fut7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174272.1 (13923298..13925882, complement)

NW_019174272.1Genomic Context describing neighboring genes Neighboring gene PAXX non-homologous end joining factor Neighboring gene ATP-binding cassette, sub-family A (ABC1), member 2 Neighboring gene neural proliferation, differentiation and control, 1b Neighboring gene niban apoptosis regulator 2b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174272 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174272.1 Reference Sdu_1.0 Primary Assembly

    Range
    13923298..13925882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022754764.1 → XP_022610485.1  alpha-(1,3)-fucosyltransferase 7

    UniProtKB/TrEMBL
    A0A3B4U4B9
    Conserved Domains (2) summary
    pfam00852
    Location:176 → 343
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:44 → 155
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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