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hs3st6 heparan sulfate-glucosamine 3-sulfotransferase 6 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111227155, updated on 21-Dec-2023

Summary

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Gene symbol
hs3st6
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 6
See related
Ensembl:ENSSDUG00000008367
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174424.1 (1848597..1861321)

NW_019174424.1Genomic Context describing neighboring genes Neighboring gene methionine-R-sulfoxide reductase B1-A-like Neighboring gene methionine-R-sulfoxide reductase B1-A-like Neighboring gene fumarylacetoacetate hydrolase domain containing 1 Neighboring gene hydroxyacylglutathione hydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174424 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174424.1 Reference Sdu_1.0 Primary Assembly

    Range
    1848597..1861321
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022752572.1 → XP_022608293.1  heparan sulfate glucosamine 3-O-sulfotransferase 6

    UniProtKB/TrEMBL
    A0A3B4U0I7
    Related
    ENSSDUP00000011465.1, ENSSDUT00000011680.1
    Conserved Domains (1) summary
    pfam00685
    Location:130 → 366
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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