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si:dkey-27i16.2 regulator of cell cycle RGCC-like [ Seriola dumerili (greater amberjack) ]

Gene ID: 111226660, updated on 15-Mar-2024

Summary

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Gene symbol
si:dkey-27i16.2
Gene description
regulator of cell cycle RGCC-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
zebrafish all
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Genomic context

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See si:dkey-27i16.2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174416.1 (1139322..1143449)

NW_019174416.1Genomic Context describing neighboring genes Neighboring gene protocadherin 20-like Neighboring gene proteolipid protein 1a Neighboring gene neuroligin 3a Neighboring gene glutamate receptor, ionotropic, AMPA 3b

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174416 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
regulator of cell cycle RGCC-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174416.1 Reference Sdu_1.0 Primary Assembly

    Range
    1139322..1143449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022751926.1 → XP_022607647.1  regulator of cell cycle RGCC-like

    Conserved Domains (1) summary
    pfam15151
    Location:9 → 112
    RGCC; Response gene to complement 32 protein family
Nucleotide Protein
Heading Accession and Version

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