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fut9a fucosyltransferase 9a [ Seriola dumerili (greater amberjack) ]

Gene ID: 111226005, updated on 15-Mar-2024

Summary

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Gene symbol
fut9a
Gene description
fucosyltransferase 9a
See related
Ensembl:ENSSDUG00000014616
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Also known as
fut9
Orthologs
human zebrafish all
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Genomic context

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See fut9a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174404.1 (7399075..7404896, complement)

NW_019174404.1Genomic Context describing neighboring genes Neighboring gene transforming growth factor-beta receptor-associated protein 1-like Neighboring gene four and a half LIM domains 5 Neighboring gene mannosidase, endo-alpha Neighboring gene serine/threonine-protein phosphatase PP1-beta catalytic subunit-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174404 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,3)-fucosyltransferase 9
Names
fucosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174404.1 Reference Sdu_1.0 Primary Assembly

    Range
    7399075..7404896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022751079.1 → XP_022606800.1  alpha-(1,3)-fucosyltransferase 9

    UniProtKB/TrEMBL
    A0A3B4UNM1
    Related
    ENSSDUP00000020089.1, ENSSDUT00000020445.1
    Conserved Domains (2) summary
    pfam00852
    Location:185 → 353
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:61 → 169
    Glyco_tran_10_N; Fucosyltransferase, N-terminal
Nucleotide Protein
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