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mpdu1b mannose-P-dolichol utilization defect 1b [ Seriola dumerili (greater amberjack) ]

Gene ID: 111223647, updated on 15-Mar-2024

Summary

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Gene symbol
mpdu1b
Gene description
mannose-P-dolichol utilization defect 1b
See related
Ensembl:ENSSDUG00000004879
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Also known as
mpdu1
Orthologs
human zebrafish all
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Genomic context

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See mpdu1b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174366.1 (2530441..2538659)

NW_019174366.1Genomic Context describing neighboring genes Neighboring gene lysophosphatidic acid receptor 6-like Neighboring gene metallo-beta-lactamase domain containing 1 Neighboring gene transcription factor Sox-19b-like Neighboring gene transcription factor Sox-19a-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174366 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-P-dolichol utilization defect 1 protein
Names
mannose-P-dolichol utilization defect 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174366.1 Reference Sdu_1.0 Primary Assembly

    Range
    2530441..2538659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022747888.1 → XP_022603609.1  mannose-P-dolichol utilization defect 1 protein

    UniProtKB/TrEMBL
    A0A3B4TK66
    Related
    ENSSDUP00000006621.1, ENSSDUT00000006752.1
    Conserved Domains (1) summary
    TIGR00951
    Location:48 → 243
    2A43; Lysosomal Cystine Transporter
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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