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msna moesin a [ Seriola dumerili (greater amberjack) ]

Gene ID: 111222162, updated on 15-Mar-2024

Summary

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Gene symbol
msna
Gene description
moesin a
See related
Ensembl:ENSSDUG00000014019
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Also known as
msn
Orthologs
human zebrafish all
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Genomic context

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See msna in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174346.1 (281870..298775, complement)

NW_019174346.1Genomic Context describing neighboring genes Neighboring gene oligophrenin 1 Neighboring gene androgen receptor-like Neighboring gene zinc finger CCCH-type containing 12B Neighboring gene APC membrane recruitment protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174346 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of early endosome to late endosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein localization to early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of organelle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in apical part of cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in filopodium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microvillus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
moesin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174346.1 Reference Sdu_1.0 Primary Assembly

    Range
    281870..298775 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022745749.1 → XP_022601470.1  moesin isoform X1

    UniProtKB/TrEMBL
    A0A3B4UL21, A0A3B4UL51
    Related
    ENSSDUP00000019254.1, ENSSDUT00000019599.1
    Conserved Domains (3) summary
    smart00295
    Location:7 → 206
    B41; Band 4.1 homologues
    cd13194
    Location:200 → 296
    FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
    pfam00769
    Location:347 → 579
    ERM; Ezrin/radixin/moesin family

  2. XM_022745750.1 → XP_022601471.1  moesin isoform X2

    Conserved Domains (3) summary
    cd13194
    Location:64 → 160
    FERM_C_ERM; FERM domain C-lobe/F3 of the ERM family
    pfam00373
    Location:26 → 70
    FERM_M; FERM central domain
    pfam00769
    Location:211 → 443
    ERM; Ezrin/radixin/moesin family
Nucleotide Protein
Heading Accession and Version

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