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b3gat2 beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [ Seriola dumerili (greater amberjack) ]

Gene ID: 111220566, updated on 15-Mar-2024

Summary

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Gene symbol
b3gat2
Gene description
beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)
See related
Ensembl:ENSSDUG00000017562
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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See b3gat2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174328.1 (1437632..1498675)

NW_019174328.1Genomic Context describing neighboring genes Neighboring gene asparaginase and isoaspartyl peptidase 1 Neighboring gene opioid growth factor receptor-like 1 Neighboring gene small ArfGAP 1 Neighboring gene solute carrier family 1 member 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174328 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174328.1 Reference Sdu_1.0 Primary Assembly

    Range
    1437632..1498675
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022743680.1 → XP_022599401.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2

    UniProtKB/TrEMBL
    A0A3B4V0R3
    Related
    ENSSDUP00000024157.1, ENSSDUT00000024610.1
    Conserved Domains (1) summary
    cd00218
    Location:63 → 286
    GlcAT-I; Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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