U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

pofut2 protein O-fucosyltransferase 2 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111218475, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
pofut2
Gene description
protein O-fucosyltransferase 2
See related
Ensembl:ENSSDUG00000014667
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See pofut2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174307.1 (9093007..9098735, complement)

NW_019174307.1Genomic Context describing neighboring genes Neighboring gene BRCA1 associated RING domain 1 Neighboring gene ATP-binding cassette, sub-family A (ABC1), member 12 Neighboring gene trans-1,2-dihydrobenzene-1,2-diol dehydrogenase-like Neighboring gene tubulin alpha chain-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_019174307 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GDP-fucose protein O-fucosyltransferase 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174307.1 Reference Sdu_1.0 Primary Assembly

    Range
    9093007..9098735 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022740802.1 → XP_022596523.1  GDP-fucose protein O-fucosyltransferase 2

    UniProtKB/TrEMBL
    A0A3B4UP80
    Related
    ENSSDUP00000020158.1, ENSSDUT00000020511.1
    Conserved Domains (1) summary
    cd11298
    Location:60 → 430
    O-FucT-2; GDP-fucose protein O-fucosyltransferase 2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.