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LOC111214109 probable galacturonosyltransferase 9 [ Brassica napus (rape) ]

Gene ID: 111214109, updated on 30-Nov-2023

Summary

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Gene symbol
LOC111214109
Gene description
probable galacturonosyltransferase 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC111214109 in Genome Data Viewer
Location:
chromosome: A3
Exon count:
7
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A3 NC_063436.1 (15107824..15116638)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A3 NC_027759.2 (21188790..21189893)

Chromosome A3 - NC_063436.1Genomic Context describing neighboring genes Neighboring gene rhamnogalacturonan I rhamnosyltransferase 1 Neighboring gene NADPH-dependent diflavin oxidoreductase 1 Neighboring gene UPF0496 protein At3g57100 Neighboring gene probable galacturonosyltransferase 9 Neighboring gene zinc finger protein CONSTANS-LIKE 2 Neighboring gene FHA domain-containing protein At4g14490-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063436.1 Reference Da-Ae Primary Assembly

    Range
    15107824..15116638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048776203.1 → XP_048632160.1  probable galacturonosyltransferase 9

  2. XM_048776204.1 → XP_048632161.1  probable galacturonosyltransferase 9

  3. XM_048776202.1 → XP_048632159.1  probable galacturonosyltransferase 9

  4. XM_048776201.1 → XP_048632158.1  probable galacturonosyltransferase 9

RNA

  1. XR_007338199.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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