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LOC111212820 rhamnogalacturonan I rhamnosyltransferase 4 [ Brassica napus (rape) ]

Gene ID: 111212820, updated on 30-Nov-2023

Summary

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Gene symbol
LOC111212820
Gene description
rhamnogalacturonan I rhamnosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC111212820 in Genome Data Viewer
Location:
chromosome: A9
Exon count:
9
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A9 NC_063442.1 (15941819..15945789, complement)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) Unplaced Scaffold NW_019169233.1 (38560..40677)

Chromosome A9 - NC_063442.1Genomic Context describing neighboring genes Neighboring gene rhamnogalacturonan I rhamnosyltransferase 4-like Neighboring gene disease resistance protein RBA1-like Neighboring gene uncharacterized LOC111212817 Neighboring gene uncharacterized LOC111212821

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rhamnogalacturonan I rhamnosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063442.1 Reference Da-Ae Primary Assembly

    Range
    15941819..15945789 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048740719.1 → XP_048596676.1  rhamnogalacturonan I rhamnosyltransferase 4 isoform X2

  2. XM_022714420.2 → XP_022570141.2  rhamnogalacturonan I rhamnosyltransferase 4 isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases