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LOC111204370 hydroxyproline O-arabinosyltransferase 3 [ Brassica napus (rape) ]

Gene ID: 111204370, updated on 30-Nov-2023

Summary

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Gene symbol
LOC111204370
Gene description
hydroxyproline O-arabinosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC111204370 in Genome Data Viewer
Location:
chromosome: A2
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A2 NC_063435.1 (1253574..1255858)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A2 NC_027758.2 (4447696..4449938)

Chromosome A2 - NC_063435.1Genomic Context describing neighboring genes Neighboring gene flowering time control protein FY Neighboring gene ADP,ATP carrier protein 2, mitochondrial-like Neighboring gene 50S ribosomal protein L10, chloroplastic-like Neighboring gene leucine aminopeptidase-like Neighboring gene myosin-11-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-arabinosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063435.1 Reference Da-Ae Primary Assembly

    Range
    1253574..1255858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022698891.2 → XP_022554612.1  hydroxyproline O-arabinosyltransferase 3

    UniProtKB/TrEMBL
    A0A816WG68
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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