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LOC111198831 probable fucosyltransferase 8 [ Brassica napus (rape) ]

Gene ID: 111198831, updated on 30-Nov-2023

Summary

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Gene symbol
LOC111198831
Gene description
probable fucosyltransferase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica napus
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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Genomic context

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See LOC111198831 in Genome Data Viewer
Location:
chromosome: A6
Exon count:
2
Annotation release Status Assembly Chr Location
102 current Da-Ae (GCF_020379485.1) A6 NC_063439.1 (5530630..5532774)
101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A6 NC_027762.2 (6296461..6297418)

Chromosome A6 - NC_063439.1Genomic Context describing neighboring genes Neighboring gene fucosyltransferase 6-like Neighboring gene probable fucosyltransferase 8 Neighboring gene 2-oxoglutarate-dependent dioxygenase DAO-like Neighboring gene 2-oxoglutarate-dependent dioxygenase DAO

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactoside 2-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xyloglucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable fucosyltransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Da-Ae Primary Assembly

Genomic

  1. NC_063439.1 Reference Da-Ae Primary Assembly

    Range
    5530630..5532774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022688155.2 → XP_022543876.2  probable fucosyltransferase 8

Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases