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LOC111189784 pulmonary surfactant-associated protein D [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 111189784, updated on 7-Sep-2022

Summary

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Gene symbol
LOC111189784
Gene description
pulmonary surfactant-associated protein D
See related
EnsemblRapid:ENSAMXG00025007461
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
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Genomic context

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See LOC111189784 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 8 NC_064415.1 (45490720..45495334, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) Unplaced Scaffold NW_019172188.1 (253716..258398)

Chromosome 8 - NC_064415.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC125803997 Neighboring gene pulmonary surfactant-associated protein D Neighboring gene RAS protein activator like 2 Neighboring gene uncharacterized LOC125804038 Neighboring gene uncharacterized LOC125804037

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
pulmonary surfactant-associated protein D

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064415.1 Reference AstMex3_surface

    Range
    45490720..45495334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022663440.2 → XP_022519161.2  pulmonary surfactant-associated protein D

    Related
    ENSAMXP00025009562.1, ENSAMXT00025013731.1
Nucleotide Protein
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