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RGMA repulsive guidance molecule BMP co-receptor a [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111187313, updated on 15-Mar-2024

Summary

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Gene symbol
RGMA
Gene description
repulsive guidance molecule BMP co-receptor a
See related
Ensembl:ENSDLEG00000006705
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See RGMA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098044.1 (16829962..16874359, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160916.1 (2239229..2283627, complement)

NW_022098044.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 174 member B Neighboring gene chromodomain helicase DNA binding protein 2 Neighboring gene uncharacterized LOC111187314 Neighboring gene kidney mitochondrial carrier protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables coreceptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in BMP signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
repulsive guidance molecule A
Names
repulsive guidance molecule family member a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098044.1 Reference ASM228892v3 Primary Assembly

    Range
    16829962..16874359 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022598847.1 → XP_022454555.1  repulsive guidance molecule A isoform X1

    UniProtKB/TrEMBL
    A0A2Y9QAD1
    Related
    ENSDLEP00000009171.1, ENSDLET00000010120.1
    Conserved Domains (2) summary
    pfam06534
    Location:227 → 407
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:48 → 222
    RGM_N; Repulsive guidance molecule (RGM) N-terminus

  2. XM_022598849.1 → XP_022454557.1  repulsive guidance molecule A isoform X2

    UniProtKB/TrEMBL
    A0A2Y9QGJ4
    Conserved Domains (2) summary
    pfam06534
    Location:211 → 391
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:32 → 206
    RGM_N; Repulsive guidance molecule (RGM) N-terminus

  3. XM_022598850.2 → XP_022454558.1  repulsive guidance molecule A isoform X2

    UniProtKB/TrEMBL
    A0A2Y9QGJ4
    Conserved Domains (2) summary
    pfam06534
    Location:211 → 391
    RGM_C; Repulsive guidance molecule (RGM) C-terminus
    pfam06535
    Location:32 → 206
    RGM_N; Repulsive guidance molecule (RGM) N-terminus
Nucleotide Protein
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