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PMM1 phosphomannomutase 1 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111186335, updated on 15-Mar-2024

Summary

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Gene symbol
PMM1
Gene description
phosphomannomutase 1
See related
Ensembl:ENSDLEG00000016320
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See PMM1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098104.1 (3894351..3902875, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160911.1 (3894506..3903030, complement)

NW_022098104.1Genomic Context describing neighboring genes Neighboring gene aconitase 2 Neighboring gene RNA polymerase III subunit H Neighboring gene cold shock domain containing C2 Neighboring gene desumoylating isopeptidase 1 Neighboring gene 40S ribosomal protein S23 pseudogene Neighboring gene X-ray repair cross complementing 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphomannomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GDP-mannose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphomannomutase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098104.1 Reference ASM228892v3 Primary Assembly

    Range
    3894351..3902875 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022596835.1 → XP_022452543.1  phosphomannomutase 1

    UniProtKB/TrEMBL
    A0A2Y9QAN5
    Related
    ENSDLEP00000022522.1, ENSDLET00000024790.1
    Conserved Domains (2) summary
    cd02585
    Location:95 → 333
    HAD_PMM; phosphomannomutase, similar to human PMM1 and PMM2, Saccharomyces Sec53p, and Arabidopsis thaliana PMM
    cl26464
    Location:14 → 91
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

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