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AMDHD2 amidohydrolase domain containing 2 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111185199, updated on 15-Mar-2024

Summary

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Gene symbol
AMDHD2
Gene description
amidohydrolase domain containing 2
See related
Ensembl:ENSDLEG00000014345
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See AMDHD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098040.1 (12460029..12466863)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160905.1 (12460747..12467581)

NW_022098040.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 24 Neighboring gene ATPase H+ transporting V0 subunit c Neighboring gene 60S ribosomal protein L39 pseudogene Neighboring gene 3-phosphoinositide dependent protein kinase 1 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylglucosamine-6-phosphate deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylglucosamine-6-phosphate deacetylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098040.1 Reference ASM228892v3 Primary Assembly

    Range
    12460029..12466863
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022594588.1 → XP_022450296.1  N-acetylglucosamine-6-phosphate deacetylase isoform X2

    UniProtKB/TrEMBL
    A0A2Y9PYR7
    Related
    ENSDLEP00000019680.1, ENSDLET00000021695.1
    Conserved Domains (1) summary
    cd00854
    Location:13 → 398
    NagA; N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to ...

  2. XM_022594587.2 → XP_022450295.1  N-acetylglucosamine-6-phosphate deacetylase isoform X1

    UniProtKB/TrEMBL
    A0A2Y9PXT1
    Conserved Domains (1) summary
    cd00854
    Location:13 → 347
    NagA; N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate. This is the first committed step in the biosynthetic pathway to ...
Nucleotide Protein
Heading Accession and Version

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