U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CNTN2 contactin 2 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111184777, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CNTN2
Gene description
contactin 2
See related
Ensembl:ENSDLEG00000004321
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CNTN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098019.1 (21381102..21413192, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160903.1 (14002436..14034531, complement)

NW_022098019.1Genomic Context describing neighboring genes Neighboring gene RB binding protein 5, histone lysine methyltransferase complex subunit Neighboring gene uncharacterized LOC111184780 Neighboring gene transmembrane protein 81 Neighboring gene neurofascin Neighboring gene uncharacterized LOC111184783

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
contactin-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098019.1 Reference ASM228892v3 Primary Assembly

    Range
    21381102..21413192 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022593661.2 → XP_022449369.1  contactin-2

    UniProtKB/TrEMBL
    A0A2Y9PR91
    Related
    ENSDLEP00000005790.1, ENSDLET00000006417.1
    Conserved Domains (5) summary
    cd05727
    Location:134 → 231
    Ig2_Contactin-2-like; Second Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd00063
    Location:818 → 910
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd04968
    Location:242 → 327
    Ig3_Contactin; Third immunoglobulin (Ig) domain of contactin
    cd04969
    Location:436 → 508
    Ig5_Contactin; Fifth immunoglobulin (Ig) domain of contactin
    cl11960
    Location:39 → 132
    Ig; Immunoglobulin domain

  2. XM_022593662.2 → XP_022449370.1  contactin-2

    UniProtKB/TrEMBL
    A0A2Y9PR91
    Conserved Domains (5) summary
    cd05727
    Location:134 → 231
    Ig2_Contactin-2-like; Second Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd00063
    Location:818 → 910
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    cd04968
    Location:242 → 327
    Ig3_Contactin; Third immunoglobulin (Ig) domain of contactin
    cd04969
    Location:436 → 508
    Ig5_Contactin; Fifth immunoglobulin (Ig) domain of contactin
    cl11960
    Location:39 → 132
    Ig; Immunoglobulin domain

RNA

  1. XR_002647398.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.