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PIGT phosphatidylinositol glycan anchor biosynthesis class T [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111184137, updated on 15-Mar-2024

Summary

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Gene symbol
PIGT
Gene description
phosphatidylinositol glycan anchor biosynthesis class T
See related
Ensembl:ENSDLEG00000001575
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See PIGT in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098028.1 (15071163..15083002, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160901.1 (61801..73688, complement)

NW_022098028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115803389 Neighboring gene early lactation protein-like Neighboring gene dysbindin domain containing 2 Neighboring gene SYS1 golgi trafficking protein Neighboring gene TP53 target 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI transamidase component PIG-T

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098028.1 Reference ASM228892v3 Primary Assembly

    Range
    15071163..15083002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022592305.2 → XP_022448013.1  GPI transamidase component PIG-T

    UniProtKB/TrEMBL
    A0A2Y9PY08
    Related
    ENSDLEP00000001927.1, ENSDLET00000002192.1
    Conserved Domains (1) summary
    pfam04113
    Location:32 → 565
    Gpi16; Gpi16 subunit, GPI transamidase component
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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