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OTOA otoancorin [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111182253, updated on 15-Mar-2024

Summary

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Gene symbol
OTOA
Gene description
otoancorin
See related
Ensembl:ENSDLEG00000008724
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See OTOA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
29
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098040.1 (27475555..27547884)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160893.1 (17012135..17084464, complement)

NW_022098040.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111182257 Neighboring gene methyltransferase 9, His-X-His N1(pi)-histidine Neighboring gene immunoglobulin superfamily member 6 Neighboring gene heparan sulfate-glucosamine 3-sulfotransferase 2 Neighboring gene uncharacterized LOC111182251

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
otoancorin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098040.1 Reference ASM228892v3 Primary Assembly

    Range
    27475555..27547884
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022588558.1 → XP_022444266.1  otoancorin isoform X1

    UniProtKB/TrEMBL
    A0A2Y9PG58
    Related
    ENSDLEP00000012047.1, ENSDLET00000013290.1

  2. XM_022588559.1 → XP_022444267.1  otoancorin isoform X2

    UniProtKB/TrEMBL
    A0A2Y9PLU4

  3. XM_022588560.1 → XP_022444268.1  otoancorin isoform X3

    UniProtKB/TrEMBL
    A0A2Y9PNC6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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