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PLA2G4B phospholipase A2 group IVB [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111181704, updated on 15-Mar-2024

Summary

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Gene symbol
PLA2G4B
Gene description
phospholipase A2 group IVB
See related
Ensembl:ENSDLEG00000002538
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See PLA2G4B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022097998.1 (9001954..9013639, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160892.1 (8607884..8626139, complement)

NW_022097998.1Genomic Context describing neighboring genes Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene EH domain containing 4 Neighboring gene spectrin beta, non-erythrocytic 5 Neighboring gene mitogen-activated protein kinase binding protein 1 Neighboring gene jumonji domain containing 7 Neighboring gene MAX dimerization protein MGA Neighboring gene N-terminal kinase-like protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2 beta
Names
jmjC domain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022097998.1 Reference ASM228892v3 Primary Assembly

    Range
    9001954..9013639 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030762729.1 → XP_030618589.1  cytosolic phospholipase A2 beta isoform X4

    UniProtKB/TrEMBL
    A0A7F8KAW7
    Related
    ENSDLEP00000003179.1, ENSDLET00000003611.1
    Conserved Domains (3) summary
    cd07201
    Location:243 → 779
    cPLA2_Grp-IVB-IVD-IVE-IVF; Group IVB, IVD, IVE, and IVF cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cd04036
    Location:11 → 130
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    pfam18695
    Location:151 → 241
    cPLA2_C2; Cytosolic phospholipases A2 C2-domain

  2. XM_030762727.1 → XP_030618587.1  cytosolic phospholipase A2 beta isoform X2

    UniProtKB/TrEMBL
    A0A7F8KFG6
    Conserved Domains (3) summary
    cd07201
    Location:215 → 751
    cPLA2_Grp-IVB-IVD-IVE-IVF; Group IVB, IVD, IVE, and IVF cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cd04036
    Location:11 → 130
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    pfam18695
    Location:151 → 205
    cPLA2_C2; Cytosolic phospholipases A2 C2-domain

  3. XM_030762726.1 → XP_030618586.1  cytosolic phospholipase A2 beta isoform X1

    UniProtKB/TrEMBL
    A0A7F8K713
    Conserved Domains (3) summary
    cd07201
    Location:233 → 769
    cPLA2_Grp-IVB-IVD-IVE-IVF; Group IVB, IVD, IVE, and IVF cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cd04036
    Location:11 → 130
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    pfam18695
    Location:151 → 226
    cPLA2_C2; Cytosolic phospholipases A2 C2-domain

  4. XM_030762728.1 → XP_030618588.1  cytosolic phospholipase A2 beta isoform X3

    UniProtKB/TrEMBL
    A0A7F8KEC6
    Conserved Domains (3) summary
    cd04036
    Location:11 → 130
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    pfam18695
    Location:151 → 241
    cPLA2_C2; Cytosolic phospholipases A2 C2-domain
    cl11396
    Location:243 → 744
    Patatin_and_cPLA2; Patatins and Phospholipases
Nucleotide Protein
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