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SIGLEC11 sialic acid binding Ig like lectin 11 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111180585, updated on 15-Mar-2024

Summary

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Gene symbol
SIGLEC11
Gene description
sialic acid binding Ig like lectin 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human all
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Genomic context

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See SIGLEC11 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098006.1 (6385660..6393889, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160889.1 (4370280..4378509, complement)

NW_022098006.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 473 Neighboring gene VRK serine/threonine kinase 3 Neighboring gene uncharacterized LOC111180586 Neighboring gene activating transcription factor 5 Neighboring gene interleukin 4 induced 1 Neighboring gene nucleoporin 62 Neighboring gene uncharacterized LOC111180594 Neighboring gene TBC1 domain family member 17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sialic acid-binding Ig-like lectin 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098006.1 Reference ASM228892v3 Primary Assembly

    Range
    6385660..6393889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022585015.1 → XP_022440723.1  sialic acid-binding Ig-like lectin 11

    UniProtKB/TrEMBL
    A0A2Y9PDT3
    Conserved Domains (2) summary
    smart00410
    Location:277 → 353
    IG_like; Immunoglobulin like
    cl11960
    Location:23 → 142
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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