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DERA deoxyribose-phosphate aldolase [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111176808, updated on 15-Mar-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
Ensembl:ENSDLEG00000001791
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098015.1 (12297881..12513559)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160873.1 (12302140..12517824)

NW_022098015.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA23 Neighboring gene glycine cleavage system H protein, mitochondrial-like Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene U6 spliceosomal RNA Neighboring gene solute carrier family 15 member 5 Neighboring gene uncharacterized LOC111176812 Neighboring gene uncharacterized LOC111176811

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098015.1 Reference ASM228892v3 Primary Assembly

    Range
    12297881..12513559
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022577677.1 → XP_022433385.1  deoxyribose-phosphate aldolase

    UniProtKB/TrEMBL
    A0A2Y9NH39
    Related
    ENSDLEP00000002217.1, ENSDLET00000002514.1
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

RNA

  1. XR_002645153.2 RNA Sequence

  2. XR_002645155.1 RNA Sequence

  3. XR_002645154.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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