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TGDS TDP-glucose 4,6-dehydratase [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111176459, updated on 15-Mar-2024

Summary

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Gene symbol
TGDS
Gene description
TDP-glucose 4,6-dehydratase
See related
Ensembl:ENSDLEG00000005526
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See TGDS in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098023.1 (15369645..15387232)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160872.1 (15334335..15352284)

NW_022098023.1Genomic Context describing neighboring genes Neighboring gene SRY-box transcription factor 21 Neighboring gene G protein-coupled receptor 180 Neighboring gene uncharacterized LOC111176460 Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene dopachrome tautomerase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dTDP-glucose 4,6-dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleotide-sugar metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dTDP-D-glucose 4,6-dehydratase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098023.1 Reference ASM228892v3 Primary Assembly

    Range
    15369645..15387232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022576943.2 → XP_022432651.1  dTDP-D-glucose 4,6-dehydratase isoform X6

    UniProtKB/TrEMBL
    A0A2Y9NI76
    Conserved Domains (1) summary
    cl25409
    Location:18 → 288
    SDR; Short-chain dehydrogenases/reductases (SDR)

  2. XM_022576942.2 → XP_022432650.1  dTDP-D-glucose 4,6-dehydratase isoform X5

    UniProtKB/TrEMBL
    A0A2Y9NEZ3
    Conserved Domains (1) summary
    cd05246
    Location:18 → 311
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

  3. XM_022576936.2 → XP_022432644.1  dTDP-D-glucose 4,6-dehydratase isoform X1

    UniProtKB/TrEMBL
    A0A2Y9NCJ2
    Conserved Domains (1) summary
    cd05246
    Location:18 → 360
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

  4. XM_022576937.2 → XP_022432645.1  dTDP-D-glucose 4,6-dehydratase isoform X2

    UniProtKB/TrEMBL
    A0A2Y9NEY8
    Conserved Domains (1) summary
    cd05246
    Location:18 → 337
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

  5. XM_022576940.2 → XP_022432648.1  dTDP-D-glucose 4,6-dehydratase isoform X4

    UniProtKB/TrEMBL
    A0A2Y9NCJ3
    Conserved Domains (1) summary
    cd05246
    Location:18 → 338
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

  6. XM_022576941.2 → XP_022432649.1  dTDP-D-glucose 4,6-dehydratase isoform X4

    UniProtKB/TrEMBL
    A0A2Y9NCJ3
    Conserved Domains (1) summary
    cd05246
    Location:18 → 338
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

  7. XM_022576939.2 → XP_022432647.1  dTDP-D-glucose 4,6-dehydratase isoform X3

    UniProtKB/TrEMBL
    A0A2Y9NMQ2
    Related
    ENSDLEP00000007487.1, ENSDLET00000008282.1
    Conserved Domains (1) summary
    cd05246
    Location:18 → 336
    dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs
Nucleotide Protein
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