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PCCA propionyl-CoA carboxylase subunit alpha [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111176422, updated on 15-Mar-2024

Summary

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Gene symbol
PCCA
Gene description
propionyl-CoA carboxylase subunit alpha
See related
Ensembl:ENSDLEG00000019776
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See PCCA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098023.1 (10410377..10761491, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160872.1 (10374959..10726122, complement)

NW_022098023.1Genomic Context describing neighboring genes Neighboring gene transmembrane O-mannosyltransferase targeting cadherins 4 Neighboring gene uncharacterized LOC115803253 Neighboring gene gamma-glutamylamine cyclotransferase Neighboring gene Zic family member 2 Neighboring gene Zic family member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables propionyl-CoA carboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
propionyl-CoA carboxylase alpha chain, mitochondrial
Names
propionyl-CoA carboxylase alpha subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098023.1 Reference ASM228892v3 Primary Assembly

    Range
    10410377..10761491 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022576842.2 → XP_022432550.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A2Y9NEN7
    Conserved Domains (1) summary
    COG4770
    Location:37 → 704
    PccA; Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism]

  2. XM_022576840.2 → XP_022432548.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A2Y9NSZ6
    Conserved Domains (1) summary
    COG4770
    Location:63 → 757
    PccA; Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism]

  3. XM_022576841.2 → XP_022432549.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A2Y9NCA9
    Related
    ENSDLEP00000027414.1, ENSDLET00000030127.1
    Conserved Domains (1) summary
    COG4770
    Location:63 → 730
    PccA; Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism]

  4. XM_022576839.2 → XP_022432547.1  propionyl-CoA carboxylase alpha chain, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2Y9NMF7
    Conserved Domains (1) summary
    COG4770
    Location:63 → 709
    PccA; Acetyl/propionyl-CoA carboxylase, alpha subunit [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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